PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00017369-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family FAR1
Protein Properties Length: 426aa    MW: 48908.3 Da    PI: 5.4563
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00017369-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.46.5e-15108180273
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekd 73 
                             Y+++A+evGF+vr+s+sk++   g ++++++vCs+eg r++++++  +e ++r +  trt+Cka+lk+k++ d
  SMil_00017369-RA_Salv 108 IYCNHAHEVGFRVRRSSSKYN-VAGVMVQKWMVCSCEGIRKDRTSSskSEGKNRATCITRTNCKASLKIKLNAD 180
                            79**************99998.8899***************99998445556667778************9974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.2E-11108180IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MEIEEQSSSN PKGNFSNFAS SDVAAYEVYV KFPLLFMWEC DDFDEERDQS NTNKEQPAVV  60
VFDDFADDYD ESRAEKKQSN LRNEGDITCL SGSLVGLKRE KVEDLYDIYC NHAHEVGFRV  120
RRSSSKYNVA GVMVQKWMVC SCEGIRKDRT SSSKSEGKNR ATCITRTNCK ASLKIKLNAD  180
DGGEFEDCWS SMISIYGLQD NSWFKRLYDL RHKWSNVYNK DFFSAGILSS RRSESMNTTI  240
GFNAKDTTSL NELYIIFKKI VERWRSKEAD DELQCSRENP TSCLPLTGFL KHASEMDEIP  300
KQDLWDKSTS GRFEKGQNSA TWRRQMVKKF YDLVVKAQEN EEARAIVEDG LNGMISAVEA  360
LKTTWQTRDV TEETEVSSSS YDELDPSHSI TKGRKQRIDH LQKSKKKKTS DASNSNQSKE  420
EWLQNS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1746022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-10FAR1-related sequence 5